I think I largely agree with your points.
I’m also really annoyed that the choice tree required a website that no longer works. Additionally, for the overall results of the graphics, I’m rather bugged the game is that hardware intensive and think they could have easily optimized to make this game more accessible to lower-end hardware. I did my entire playthrough on an AMD laptop with iGPU (on Linux through Proton), and it was mostly playable.
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One of the worst parts graphically was the tractor beam at the mining facility; if I looked away from it, I could do around 24 fps, but the moment I looked at it, the game game became a slideshow.
However, it was still really fun, and I only payed $12.50 for it.
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I wish I didn’t have to hate Bedrosian, but the universal hate is deserved. She suggests genocide with the frequency Worf suggests firing phasers or Shaxs suggests ejecting the warp core. I really wish they would have toned it doen a bit or written her differently.
Also, I wish we had more time with Urmott; as good an officer he was, he had less chance to impress me than Westbrook, and thus I couldn’t choose him as first officer. Part of this is just an inherent structure issue with Starfleet (as summed up in Eddington’s “you don’t get to be captain wearing a gold uniform” or the story of Harry Kim), but honestly, for being the first officer you meet (besides Ensign cannon fodder), his story underwhelms.
Though really, if I could really choose, I’d try to make the doctor my first officer, though I’m not sure she would have accepted.
I did really enjoy the starbase and Resolute environments, and I wish more games would immerse the player in a Starfleet ship that way.
Also, anyone else think the space British empire aliens all just looked like a realistic rendering of Squidward?

I press X, and they make up some BS about how your unorthodox solution changes the warp geometry in just the right way. Picard gives you some sort of rant about being more careful in the future, a neutral relationship impact. Meanwhile, Chief tactical Lieutenant Murder-Anything-That-Isn't Human is so impressed their bio now says they want to marry you, though you know that will quickly change to shove you out an airlock unless you are a total psychopath.