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Thanks for your reply. The point here is not about the merits of distrobox for security. This is a constraint that is not easily changed. It is only an element present, not an implementation of sandboxing.
I am looking for the best method that is hopefully less complicated than a systemwide SELinux policy plus Pam and Groups.
If anything, the distrobox is an added issue due to the nobody user.
I guess I just don't understand your question. Explain in more detail.
Really think about the Ws (who, what, where, when, how).
If you want to protect against an "advanced" threat actor, you can not do that without multiple layers of isolation, including but not limited to virtualization, MAC (SELinux), namespaces, seccomp.
All protections are meaningless without a clear understanding of what assets you are protecting, the threat you face, and they want from you.